Calcualte The Gene Drug Sensitivity — geneDrugSensitivity • PharmacoGx

TODO:: Write a description!

Usage

geneDrugSensitivity(
  x,
  type,
  batch,
  drugpheno,
  interaction.typexgene = FALSE,
  model = FALSE,
  standardize = c("SD", "rescale", "none"),
  verbose = FALSE
)

Arguments

x: A numeric vector of gene expression values
type: A vector of factors specifying the cell lines or type types
batch: A vector of factors specifying the batch
drugpheno: A numeric vector of drug sensitivity values (e.g., IC50 or AUC)
interaction.typexgene: boolean Should interaction between gene expression and cell/type type be computed? Default set to FALSE
model: boolean Should the full linear model be returned? Default set to FALSE
standardize: character One of 'SD', 'rescale' or 'none'
verbose: boolean Should the function display messages?

Value

A vector reporting the effect size (estimate of the coefficient of drug concentration), standard error (se), sample size (n), t statistic, and F statistics and its corresponding p-value.

Examples

print("TODO::")
#> [1] "TODO::"