List of deprecated or defunct methods in the CoreGx R package.

List of deprecated or defunct methods in the CoreGx R package.

Details

deprecated

CoreSet: The CoreSet constructor is being updated to have a new API. This API is currently available via the CoreSet2 constructor. In Bioconductor 3.16, the old constructor will be renamed CoreSet2 and the new constructor will be renamed CoreSet.

defunct

buildLongTable: This function no longer works as building a LongTable or TreatmentResponseExperiment now uses a DataMapper and the metaConstruct method. See vignette("LongTable") for a detailed description of how to create a LongTable object.