Survival Analysis#
Survival analysis is a key statistical approach used to study time-to-event outcomes like time until disease progression, relapse, or death. Unlike traditional regression methods, survival analysis accounts for censoring (patients lost to follow-up or still alive at study end) and allows estimation of event probabilities over time.
Survival analysis is often used to:
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Evaluate the impact of potential biomarkers on treatment response and patient outcomes.
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Compare survival curves across patient subgroups (e.g., different mutation profiles, treatments, methods in multicentre studies, etc.).
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Identify predictive markers of drug benefit or toxicity.
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Build models that can use multiomic data to guide precision medicine.
Commonly used methods include:
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Kaplan–Meier curves: non-parametric estimates of survival probabilities over time.
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Cox proportional hazards models: regression framework to evaluate covariates (e.g., gene mutations, drug classes) affecting hazard rates.
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Random survival forests / survival support vector machines / deep learning survival models: machine learning approaches that can capture complex interactions in high-dimensional omics datasets.
Recommended Learning Resources
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🎥 Video Playlist - Survival Analysis | Concepts and Implementation in R (YouTube)
Great introduction to both fundamentals and applied examples in R.
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📘 Tutorial in R – Survival Analysis in R | Slide
Hands-on guidance with code snippets.
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📄 Articles
- An Introduction to Survival Statistics: Kaplan–Meier Analysis (PMC)
Clear explanation of Kaplan–Meier methodology with biomedical applications. - Survival Analysis Part I: Basic concepts and first analyses
Survival Analysis Part II: Multivariate data analysis – an introduction to concepts and methods
Survival Analysis Part III: Multivariate data analysis – choosing a model and assessing its adequacy and fit
Survival Analysis Part IV: Further concepts and methods in survival analysis
A four-part series covering basic methods and terminology in survival analysis. Frequently asked questions are addressed in Part IV.
- An Introduction to Survival Statistics: Kaplan–Meier Analysis (PMC)