Annotate PubChem Compound

This function retrieves information about a PubChem compound based on the provided compound ID (CID).

Usage

annotatePubchemCompound(
  cids,
  heading = "ChEMBL ID",
  source = NULL,
  parse_function = identity,
  query_only = FALSE,
  raw = FALSE,
  nParallel = 1
)

Arguments

cids

The compound ID (CID) of the PubChem compound.

heading

The type of information to retrieve. Default is "ChEMBL ID".

source

The data source to use. Default is NULL.

parse_function

A custom parsing function to process the response. Default is the identity function.

query_only

Logical indicating whether to return the query URL only. Default is FALSE.

raw

Logical indicating whether to return the raw response. Default is FALSE.

nParallel

The number of parallel processes to use. Default is 1.

Value

The annotated information about the PubChem compound.

Examples

annotatePubchemCompound(cid = 2244)
#> [1] "CHEMBL25"
annotatePubchemCompound(cid = c(2244, 67890), heading = "CAS")
#> [1] "50-78-2"  "407-59-0"