A data.frame containing global chromatin profiling of histone marks for the Cancer Cell Line Encyclopedia (CCLE) dataset.
Source: R/CBWWorkshop2024_module1_data.R
CCLE_chromatin.RdThis is a subset of the CCLE histone modification dataset from Ghandi et al. 2019 that includes enrichment of histone marks across different genomic regions.
Usage
data(CCLE_chromatin)References
Ghandi, M., Huang, F. W., Jané-Valbuena, J., Kryukov, G. V., Lo, C. C., McDonald, E. R., Barretina, J., Gelfand, E. T., Bielski, C. M., Li, H., Hu, K., Andreev-Drakhlin, A. Y., Kim, J., Hess, J. M., Haas, B. J., Aguet, F., Weir, B. A., Rothberg, M. V., Paolella, B. R., … Golub, T. R. (2019). Next-generation characterization of the Cancer Cell Line Encyclopedia. Nature, 569(7757), 503–508. https://doi.org/10.1038/s41586-019-1186-3